C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatase domain containing, paladin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263563 PALD1-001 ENSG00000107719 9606 + 10:70478821-70568449 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263563
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263563 4.884±0.00 10.306±0.00 0.409±0.00 1.944±0.96 2.117±0.00 1.700±1.15 1.349±1.24 1.258±1.10 0.856±0.00 4.611±4.19 0.564±0.24 3.736±2.05 4.722±0.30 2.660±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020289 Pald1-201 protein_coding Mus_musculus 0 2274
ENSMUST00000108908 Scn8a-203 protein_coding Mus_musculus 1e-18 100
ENSMUST00000108909 Scn8a-204 protein_coding Mus_musculus 1e-18 100
ENSMUST00000108910 Scn8a-205 protein_coding Mus_musculus 1e-18 100
ENSMUST00000082209 Scn8a-201 protein_coding Mus_musculus 1e-18 100
ENSMUST00000006311 Tead4-001 protein_coding Mus_musculus 0.00008 55

Loading