C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: S1 RNA binding domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263736 SRBD1-001 ENSG00000068784 9606 - 2:45388680-45611281 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263736
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263736 2.270±0.00 1.645±0.00 2.068±0.00 0.362±0.18 2.049±0.64 1.423±0.47 1.214±0.43 1.837±0.06 2.054±1.00 2.218±0.93 0.851±0.41 2.305±0.71 2.207±0.80 5.470±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KD CIL_0007KD_0001 UCNEbase 2:44450120-45456944
CIL_0000RS CIL_0000RS_0001 CGP 2:45005161-45612165
CIL_0001NP CIL_0001NP_0001 CGP 2:45388680-46187990

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0006139 IEA nucleobase-containing compound metabolic process
GO:0016788 IEA hydrolase activity, acting on ester bonds

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095187 Srbd1-201 protein_coding Mus_musculus 0 2697

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