C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamyl-tRNA(Gln) amidotransferase, subunit B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263985 GATB-001 ENSG00000059691 9606 - 4:151670504-151761023 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000263985
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000263985 0.439±0.00 2.307±0.00 1.020±0.00 0.423±0.00 3.557±0.23 1.083±0.61 2.097±0.00 0.249±0.00 2.552±0.00 1.622±0.63 1.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000OB CIL_0000OB_0002 CGP 4:151409216-151761023

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006412 TAS translation
GO:0008135 TAS translation factor activity, nucleic acid binding
GO:0016874 IEA ligase activity
GO:0016884 IEA carbon-nitrogen ligase activity, with glutamine as amido-N-donor
GO:0030956 IDA glutamyl-tRNA(Gln) amidotransferase complex
GO:0032543 IMP mitochondrial translation
GO:0050567 IDA glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
GO:0070681 IDA glutaminyl-tRNAGln biosynthesis via transamidation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127348 Pet112-001 protein_coding Mus_musculus 0 1834
ENSMUST00000107674 Pet112-004 protein_coding Mus_musculus 0 1711
ENSMUST00000107672 Pet112-003 protein_coding Mus_musculus 0 1618
ENSMUST00000029726 Pet112-002 processed_transcript Mus_musculus 0 1284
ENSMUST00000134273 Pet112-005 processed_transcript Mus_musculus 0 353

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