C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264449 ATP8A1-003 ENSG00000124406 9606 - 4:42408377-42657093 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000264449
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000264449 0.749±0.00 0.898±0.00 0.843±0.00 6.658±0.69 1.626±0.83 4.948±2.68 0.505±0.12 0.562±0.00 0.353±0.32 4.562±3.11 0.876±0.28 0.233±0.00 0.587±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OI CIL_0007OI_0001 UCNEbase 4:41748045-42425642
CIL_0007YP CIL_0007YP_0001 VISTA 4:41848074-42449047
CIL_0002Z0 CIL_0002Z0_0001 CGP 4:42397839-42657105

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0008152 IEA metabolic process
GO:0015914 IEA phospholipid transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0019829 NAS cation-transporting ATPase activity
GO:0031410 IEA cytoplasmic vesicle
GO:0034220 TAS ion transmembrane transport
GO:0045332 IEA:NAS phospholipid translocation
GO:0046872 IEA metal ion binding
GO:0055085 TAS transmembrane transport
GO:0070062 IDA extracellular vesicular exosome
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072971 Atp8a1-002 protein_coding Mus_musculus 0 4601
ENSMUST00000037380 Atp8a1-001 protein_coding Mus_musculus 0 2695
ENSMUST00000135930 Atp8a1-003 protein_coding Mus_musculus 0 2514
ENSMUST00000155911 Atp8a1-005 retained_intron Mus_musculus 0 2231
ENSMUST00000149501 Atp8a1-012 processed_transcript Mus_musculus 0 845
ENSMUST00000113652 Atp8a1-004 protein_coding Mus_musculus 0 828
ENSMUST00000143013 Atp8a1-010 retained_intron Mus_musculus 0 712
ENSMUST00000113651 Atp8a1-006 protein_coding Mus_musculus 0 580
ENSMUST00000130652 Atp8a1-008 processed_transcript Mus_musculus 0 536
ENSMUST00000152433 Atp8a1-011 retained_intron Mus_musculus 0 329
ENSMUST00000128726 Atp8a1-009 retained_intron Mus_musculus 0 300
ENSMUST00000141443 Atp8a1-007 protein_coding Mus_musculus 0 294

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