C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: granzyme M (lymphocyte met-ase 1)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264553 GZMM-001 ENSG00000197540 9606 + 19:544035-549924 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264553
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264553 0.039±0.00 11.612±0.00 0.107±0.00 0.711±0.56 0.044±0.00 0.036±0.00 0.041±0.02 0.098±0.00 4.029±3.22 0.053±0.00 0.963±0.66 0.457±0.40 0.206±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0001 VISTA 19:477571-1083531
CIL_0001FW CIL_0001FW_0001 CGP 19:531712-549924
CIL_00008J CIL_00008J_0001 CGP 19:544034-583493

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004175 IEA endopeptidase activity
GO:0004252 IEA serine-type endopeptidase activity
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0006508 IEA proteolysis
GO:0006915 IEA apoptotic process
GO:0008236 TAS serine-type peptidase activity
GO:0016020 IDA membrane
GO:0019835 IEA cytolysis
GO:0045087 IEA innate immune response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020549 Gzmm-001 protein_coding Mus_musculus 0 265
ENSMUST00000151213 Gzmm-002 processed_transcript Mus_musculus 0 228

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