C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lectin, mannose-binding 2-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264963 LMAN2L-001 ENSG00000114988 9606 - 2:96705929-96740063 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264963
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264963 3.145±0.00 3.333±0.00 2.594±0.00 1.219±0.06 4.929±3.05 7.082±6.47 3.517±1.27 8.666±5.64 3.789±1.14 1.657±1.07 1.772±1.19 11.617±5.48 8.808±1.59 8.269±1.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OA CIL_0003OA_0001 CGP 2:96705929-96811891

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005537 TAS mannose binding
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005794 IDA Golgi apparatus
GO:0006457 NAS protein folding
GO:0006888 TAS ER to Golgi vesicle-mediated transport
GO:0015031 IMP protein transport
GO:0016020 IEA membrane
GO:0016021 TAS integral component of membrane
GO:0030134 NAS ER to Golgi transport vesicle
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125304 Lman2l-001 protein_coding Mus_musculus 0 1321
ENSMUST00000134594 Lman2l-004 retained_intron Mus_musculus 0 985
ENSMUST00000001171 Lman2l-003 nonsense_mediated_decay Mus_musculus 0 704
ENSMUST00000115011 Lman2l-002 protein_coding Mus_musculus 0 704
ENSMUST00000123583 Lman2l-006 nonsense_mediated_decay Mus_musculus 0 407
ENSMUST00000152088 Lman2l-005 protein_coding Mus_musculus 0 364

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