C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polypeptide N-acetylgalactosaminyltransferase 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265000 GALNT7-001 ENSG00000109586 9606 + 4:173168753-173323967 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000265000
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000265000 1.022±0.00 1.099±0.00 0.669±0.22 2.263±0.73 3.814±0.32 0.588±0.51 2.138±1.97 1.668±0.04 0.113±0.08 3.815±1.47 3.748±1.39 2.933±0.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007Y CIL_00007Y_0002 CGP 4:171812254-173323967
CIL_00007T CIL_00007T_0002 CGP 4:173168753-173335125

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0004653 IEA polypeptide N-acetylgalactosaminyltransferase activity
GO:0005975 TAS carbohydrate metabolic process
GO:0006493 TAS protein O-linked glycosylation
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016266 TAS O-glycan processing
GO:0030246 IEA carbohydrate binding
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034021 Galnt7-001 protein_coding Mus_musculus 0 3295
ENSMUST00000110316 Galnt7-002 protein_coding Mus_musculus 0 2988
ENSMUST00000156907 Galnt7-003 retained_intron Mus_musculus 0 1559
ENSMUST00000139417 Galnt7-004 processed_transcript Mus_musculus 0 946
ENSDART00000114903 galnt7-201 protein_coding Danio_rerio 0 675
ENSDART00000079928 galnt7-001 protein_coding Danio_rerio 0 641
ENSDART00000135666 galnt7-002 protein_coding Danio_rerio 0 292

Loading