C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exportin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265351 XPO5-001 ENSG00000124571 9606 - 6:43522330-43576075 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265351
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265351 4.163±0.00 2.431±0.00 0.440±0.00 2.164±0.15 3.023±1.29 2.850±0.00 1.562±1.46 4.446±0.00 1.291±0.82 3.467±0.00 4.429±0.00 9.311±5.72 4.918±0.28 17.696±4.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YI CIL_0008YI_0001 VISTA 6:43493027-44094540
CIL_0005N0 CIL_0005N0_0001 CGP 6:43509702-43529585

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 IEA tRNA binding
GO:0003723 TAS RNA binding
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006611 IEA protein export from nucleus
GO:0006886 IEA intracellular protein transport
GO:0008536 IEA Ran GTPase binding
GO:0008565 IEA protein transporter activity
GO:0010467 TAS gene expression
GO:0031047 IEA gene silencing by RNA
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087031 Xpo5-201 protein_coding Mus_musculus 0 4043

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