C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nibrin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265433 NBN-001 ENSG00000104320 9606 - 8:89933336-89984716 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000265433
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000265433 1.326±0.00 2.840±0.00 3.456±1.83 1.766±0.36 2.563±0.11 0.893±0.00 2.987±0.00 4.355±0.00 0.886±0.11 3.341±1.51 3.228±0.41 2.806±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000077 IDA DNA damage checkpoint
GO:0000723 IMP telomere maintenance
GO:0000724 TAS double-strand break repair via homologous recombination
GO:0000784 IDA nuclear chromosome, telomeric region
GO:0001701 IEA in utero embryonic development
GO:0001832 IEA blastocyst growth
GO:0003684 IC damaged DNA binding
GO:0004003 IMP ATP-dependent DNA helicase activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005657 IEA replication fork
GO:0005730 IDA nucleolus
GO:0006281 TAS DNA repair
GO:0006302 IDA double-strand break repair
GO:0007050 TAS cell cycle arrest
GO:0007093 IDA mitotic cell cycle checkpoint
GO:0007095 IDA mitotic G2 DNA damage checkpoint
GO:0008134 IPI transcription factor binding
GO:0008283 IEA cell proliferation
GO:0016605 IDA PML body
GO:0030174 TAS regulation of DNA-dependent DNA replication initiation
GO:0030330 TAS DNA damage response, signal transduction by p53 class mediator
GO:0030870 IDA Mre11 complex
GO:0031954 IDA positive regulation of protein autophosphorylation
GO:0032508 IMP DNA duplex unwinding
GO:0033674 IDA positive regulation of kinase activity
GO:0035861 IDA site of double-strand break
GO:0042405 IDA nuclear inclusion body
GO:0045190 IEA isotype switching
GO:0047485 IPI protein N-terminus binding
GO:0050885 IEA neuromuscular process controlling balance
GO:0051321 IEA meiotic cell cycle
GO:0097193 IEA intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029879 Nbn-001 protein_coding Mus_musculus 0 1495
ENSMUST00000149069 Nbn-002 protein_coding Mus_musculus 0 1319

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