C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dedicator of cytokinesis 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000266037 DOCK3-001 ENSG00000088538 9606 + 3:50675241-51384198 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000266037
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000266037 0.127±0.00 0.173±0.00 0.110±0.00 7.191±0.23 0.193±0.07 0.425±0.27 0.631±0.43 0.134±0.13 0.161±0.16 0.151±0.00 0.437±0.00 0.111±0.08 0.049±0.03 1.239±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D8 CIL_0008D8_0001 VISTA 3:50299047-50902727
CIL_0003FL CIL_0003FL_0002 CGP 3:50675241-51389397

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0007264 IEA small GTPase mediated signal transduction
GO:0017124 IEA SH3 domain binding
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044532 Dock3-001 protein_coding Mus_musculus 0 9057
ENSDART00000149666 dock3-001 protein_coding Danio_rerio 0 1831
ENSMUST00000171095 Dock3-002 protein_coding Mus_musculus 0 1740
ENSDART00000092090 dock3-201 protein_coding Danio_rerio 0 1423
ENSMUST00000167053 Dock3-003 retained_intron Mus_musculus 0 1144
ENSMUST00000165075 Dock3-011 protein_coding Mus_musculus 0 917
ENSMUST00000168759 Dock3-007 protein_coding Mus_musculus 0 797
ENSMUST00000166759 Dock3-008 retained_intron Mus_musculus 0 660
ENSDART00000136355 dock4b-001 protein_coding Danio_rerio 0 654
ENSDART00000036646 dock4b-201 protein_coding Danio_rerio 0 542
ENSMUST00000165182 Dock3-004 retained_intron Mus_musculus 0 508
ENSMUST00000165562 Dock3-010 processed_transcript Mus_musculus 0 486
ENSMUST00000169164 Dock3-005 retained_intron Mus_musculus 0 483
ENSMUST00000170193 Dock3-006 retained_intron Mus_musculus 0 309

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