C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: rhomboid, veinlet-like 3 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000269051 RHBDL3-001 ENSG00000141314 9606 + 17:32266176-32324661 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000269051
Transcript ID Brain
ENST00000269051 7.271±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VO CIL_0000VO_0001 CGP 17:32142454-32324661
CIL_0000VP CIL_0000VP_0001 CGP 17:32266176-32350023

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0006508 IEA proteolysis
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017836 Rhbdl3-001 protein_coding Mus_musculus 0 1633
ENSMUST00000157016 Rhbdl3-002 retained_intron Mus_musculus 0 438
ENSMUST00000138846 Rhbdl3-003 retained_intron Mus_musculus 0 363

Loading