C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger CCCH-type containing 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000272570 ZC3H8-201 ENSG00000144161 9606 - 2:112215865-112255087 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartLiverLungOvaryTestisENST00000272570
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Liver Lung Ovary Testis
ENST00000272570 0.360±0.00 1.802±0.00 0.489±0.00 1.565±0.00 0.647±0.14 1.042±0.25 1.299±0.74 0.724±0.00 3.438±1.56 4.155±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00047V CIL_00047V_0001 CGP 2:112138385-112255136

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IMP sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0006915 IEA apoptotic process
GO:0008023 IDA transcription elongation factor complex
GO:0015030 IDA Cajal body
GO:0033085 IMP negative regulation of T cell differentiation in thymus
GO:0035327 IDA transcriptionally active chromatin
GO:0035363 IDA histone locus body
GO:0042795 IMP snRNA transcription from RNA polymerase II promoter
GO:0042796 IMP snRNA transcription from RNA polymerase III promoter
GO:0043029 IMP T cell homeostasis
GO:0043565 ISS sequence-specific DNA binding
GO:0044822 IDA poly(A) RNA binding
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0045945 IMP positive regulation of transcription from RNA polymerase III promoter
GO:0046677 IDA response to antibiotic
GO:0046872 IEA metal ion binding
GO:0070245 IMP positive regulation of thymocyte apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028866 Zc3h8-001 protein_coding Mus_musculus 0 758

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