C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine-rich repeats and immunoglobulin-like domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000273261 LRIG1-001 ENSG00000144749 9606 - 3:66378797-66500932 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000273261
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000273261 6.339±0.00 3.849±0.00 0.286±0.00 8.617±6.28 5.800±0.34 7.789±0.20 17.795±13.82 4.853±0.00 3.317±0.17 9.110±4.40 6.825±5.26 5.919±2.26 1.746±0.68 4.036±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034P CIL_00034P_0001 CGP 3:65353525-66388116
CIL_0003RB CIL_0003RB_0002 CGP 3:66133610-66501263
CIL_0009B3 CIL_0009B3_0001 VISTA 3:66275404-66878578
CIL_0003RC CIL_0003RC_0002 CGP 3:66378797-67011210

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0007605 IEA sensory perception of sound
GO:0016021 IEA integral component of membrane
GO:0032474 IEA otolith morphogenesis
GO:0060384 IEA innervation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101126 Lrig1-002 protein_coding Mus_musculus 0 3175
ENSMUST00000032105 Lrig1-001 protein_coding Mus_musculus 0 3175
ENSMUST00000141014 Lrig1-004 processed_transcript Mus_musculus 0 641
ENSMUST00000150811 Lrig1-003 processed_transcript Mus_musculus 0 412
ENSMUST00000061118 Slc25a26-201 protein_coding Mus_musculus 0 193

Loading