C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger with KRAB and SCAN domains 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000273320 ZKSCAN7-001 ENSG00000196345 9606 + 3:44555208-44572158 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverPlacentaENST00000273320
Transcript ID Kidney Liver Placenta
ENST00000273320 0.554±0.26 0.201±0.00 0.273±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041R CIL_00041R_0002 CGP 3:44498970-44583483

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063980 Zkscan7-201 protein_coding Mus_musculus 0 1175
ENSMUST00000060762 Zfp397-201 protein_coding Mus_musculus 0 215
ENSMUST00000165640 Zfp113-201 protein_coding Mus_musculus 1.96182e-44 185
ENSMUST00000049393 Zfp113-001 protein_coding Mus_musculus 1.96182e-44 185
ENSMUST00000060444 Zfp3-001 protein_coding Mus_musculus 3.99931e-42 178
ENSMUST00000051667 Zfp105-001 protein_coding Mus_musculus 9.99967e-42 176
ENSMUST00000099720 Zscan12-002 protein_coding Mus_musculus 3e-38 165
ENSMUST00000053293 Zscan12-001 protein_coding Mus_musculus 3e-38 165
ENSMUST00000062609 Zkscan4-001 protein_coding Mus_musculus 6e-35 154
ENSMUST00000117721 Zkscan3-004 protein_coding Mus_musculus 3e-33 148
ENSMUST00000070785 Zkscan3-003 protein_coding Mus_musculus 3e-33 148
ENSMUST00000116433 Zkscan3-002 protein_coding Mus_musculus 3e-33 148
ENSMUST00000116434 Zkscan3-001 protein_coding Mus_musculus 3e-33 148
ENSMUST00000057652 Zfp420-001 protein_coding Mus_musculus 1e-32 147
ENSMUST00000145952 Zfp420-003 processed_transcript Mus_musculus 1e-32 147
ENSMUST00000074876 Zfp420-002 protein_coding Mus_musculus 1e-32 147
ENSMUST00000076238 Gm10065-201 protein_coding Mus_musculus 5e-31 141
ENSMUST00000034382 Zfp90-201 protein_coding Mus_musculus 5e-31 141
ENSMUST00000186475 protein_coding Mus_musculus 6e-25 121
ENSMUST00000187028 nonsense_mediated_decay Mus_musculus 6e-25 121
ENSMUST00000121178 Gm14229-001 processed_pseudogene Mus_musculus 8e-24 117
ENSMUST00000074941 Zfp35-001 protein_coding Mus_musculus 8e-24 117
ENSMUST00000183125 Zfp386-002 protein_coding Mus_musculus 5e-21 108
ENSMUST00000073551 Zfp386-001 protein_coding Mus_musculus 5e-21 108
ENSMUST00000172579 2410141K09Rik-003 protein_coding Mus_musculus 2e-20 106
ENSMUST00000110481 Zkscan8-002 protein_coding Mus_musculus 8e-19 100
ENSMUST00000156674 Zkscan8-003 protein_coding Mus_musculus 8e-19 100
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 8e-19 100
ENSMUST00000130272 Zfp420-005 retained_intron Mus_musculus 0.000000000000006 88
ENSMUST00000174558 Gm2381-001 protein_coding Mus_musculus 0.00000000001 77
ENSMUST00000110216 Zfp930-201 protein_coding Mus_musculus 0.0000000002 73
ENSMUST00000054780 Zfp959-001 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000099439 Gm4767-201 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000188096 Gm4767-001 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000105315 Gm10778-201 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000189672 Gm10778-001 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000091481 Zfp72-201 protein_coding Mus_musculus 0.000001 60

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