C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium large conductance calcium-activated channel, subfamily M, beta member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000274629 KCNMB1-001 ENSG00000145936 9606 - 5:170374671-170389677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000274629
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000274629 1.298±0.00 5.961±0.00 0.128±0.00 0.224±0.20 0.833±0.46 9.387±8.84 0.192±0.11 0.383±0.25 1.404±1.31 1.058±0.60 0.560±0.00 1.310±1.17 0.438±0.25 5.503±5.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00023U CIL_00023U_0001 CGP 5:170353487-170736632

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0006813 TAS:IEA potassium ion transport
GO:0007268 TAS synaptic transmission
GO:0007596 TAS blood coagulation
GO:0008076 IEA voltage-gated potassium channel complex
GO:0015269 IEA calcium-activated potassium channel activity
GO:0015459 IEA potassium channel regulator activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0051592 IEA response to calcium ion
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020362 Kcnmb1-001 protein_coding Mus_musculus 0 691
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000002 64

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