C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ER lipid raft associated 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000276461 ERLIN2-001 ENSG00000147475 9606 + 8:37736627-37759101 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000276461
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000276461 4.661±0.00 3.679±0.00 4.410±0.00 4.540±2.74 3.919±0.00 0.417±0.00 1.641±0.00 0.668±0.00 1.686±0.00 3.757±3.43 3.859±0.00 3.963±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000802 CIL_000802_0001 VISTA 8:37337791-37938686
CIL_0009C5 CIL_0009C5_0001 VISTA 8:37525567-38127835
CIL_0007QT CIL_0007QT_0001 VISTA 8:37525572-38127829
CIL_0002IU CIL_0002IU_0001 CGP 8:37695751-37759101
CIL_0002IV CIL_0002IV_0001 CGP 8:37736599-37779767

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0008219 IEA cell death
GO:0016021 IEA integral component of membrane
GO:0030433 IDA ER-associated ubiquitin-dependent protein catabolic process
GO:0043234 IDA protein complex
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033873 Erlin2-201 protein_coding Mus_musculus 0 1360

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