C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntabulin (syntaxin-interacting)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000276646 SYBU-009 ENSG00000147642 9606 - 8:109574186-109644817 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverLungOvaryPlacentaTestisENST00000276646
Transcript ID Adipose Adrenal Brain Breast Heart Liver Lung Ovary Placenta Testis
ENST00000276646 1.691±0.00 1.876±0.00 12.881±0.00 2.028±0.00 0.862±0.82 4.481±0.00 1.153±0.00 1.632±0.00 0.655±0.32 3.300±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060H CIL_00060H_0001 CGP 8:109539711-109691791
CIL_0005RR CIL_0005RR_0001 CGP 8:109573978-109975847

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005794 IEA Golgi apparatus
GO:0005856 IEA cytoskeleton
GO:0016021 IEA integral component of membrane
GO:0017075 IEA syntaxin-1 binding
GO:0019894 IEA kinesin binding
GO:0031410 IEA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090057 Sybu-201 protein_coding Mus_musculus 0 2564
ENSMUST00000110267 Sybu-202 protein_coding Mus_musculus 0 2564
ENSMUST00000110269 Sybu-203 protein_coding Mus_musculus 0 2281

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