C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LSM14B, SCD6 homolog B (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000279068 LSM14B-001 ENSG00000149657 9606 + 20:62122507-62135378 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000279068
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000279068 6.012±0.00 4.973±0.00 1.273±0.00 6.820±3.26 3.556±2.53 3.220±1.94 1.159±0.00 7.322±0.00 4.582±0.00 4.504±1.72 18.820±18.00 10.033±5.67 34.079±14.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001DN CIL_0001DN_0001 CGP 20:61953469-62135378
CIL_0001DO CIL_0001DO_0001 CGP 20:62122461-62143440

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000055485 Lsm14b-001 protein_coding Mus_musculus 0 1844
ENSMUST00000058764 Lsm14b-002 protein_coding Mus_musculus 0 1118
ENSMUST00000140257 Lsm14b-003 processed_transcript Mus_musculus 0 523
ENSMUST00000085585 Lsm14a-001 protein_coding Mus_musculus 2.00386e-43 182

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