C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC24 family member D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000280551 SEC24D-001 ENSG00000150961 9606 - 4:118722823-118836138 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000280551
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000280551 5.302±0.00 4.572±0.00 1.637±0.33 4.423±0.46 3.834±1.95 2.093±1.24 8.128±0.00 6.204±2.25 8.582±4.78 1.162±0.40 5.098±1.98 11.748±3.15 6.650±2.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001701 IEA in utero embryonic development
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0003674 ND molecular_function
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005829 TAS cytosol
GO:0006886 IEA intracellular protein transport
GO:0006888 IEA:NAS ER to Golgi vesicle-mediated transport
GO:0008270 IEA zinc ion binding
GO:0012507 TAS ER to Golgi transport vesicle membrane
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030127 IEA:NAS COPII vesicle coat
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0048208 TAS COPII vesicle coating
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047923 Sec24d-201 protein_coding Mus_musculus 0 3302

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