C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chaperonin containing TCP1, subunit 8 (theta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000286788 CCT8-003 ENSG00000156261 9606 - 21:29056324-29073797 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000286788
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000286788 22.973±0.00 26.091±0.00 8.910±0.00 19.748±2.87 17.116±6.27 25.527±7.26 8.611±0.00 13.898±0.00 19.219±0.00 12.482±4.99 13.090±2.88 53.751±10.92 41.958±4.20 23.774±8.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000313 CIL_000313_0001 CGP 21:29024629-29073797
CIL_0000MN CIL_0000MN_0002 CGP 21:29055805-29175889

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002199 IEA zona pellucida receptor complex
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0005829 IDA cytosol
GO:0005832 IEA chaperonin-containing T-complex
GO:0005874 IDA microtubule
GO:0006200 TAS ATP catabolic process
GO:0006457 TAS:IEA protein folding
GO:0007339 IEA binding of sperm to zona pellucida
GO:0016235 IDA aggresome
GO:0042623 TAS ATPase activity, coupled
GO:0044267 TAS:IEA cellular protein metabolic process
GO:0044297 IEA cell body
GO:0045111 IDA intermediate filament cytoskeleton
GO:0046931 IEA pore complex assembly
GO:0051082 IEA unfolded protein binding
GO:0051084 TAS 'de novo' posttranslational protein folding
GO:0070062 IDA extracellular vesicular exosome
GO:1901998 IEA toxin transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026704 Cct8-001 protein_coding Mus_musculus 0 2032
ENSMUST00000177376 Cct8-002 nonsense_mediated_decay Mus_musculus 0 1712
ENSMUST00000175977 Cct8-003 protein_coding Mus_musculus 0 1347
ENSMUST00000175750 Cct8-005 protein_coding Mus_musculus 0 760
ENSMUST00000176041 Cct8-007 protein_coding Mus_musculus 0 582
ENSMUST00000176750 Cct8-008 protein_coding Mus_musculus 0 580
ENSMUST00000177301 Cct8-006 processed_transcript Mus_musculus 0 449
ENSMUST00000176241 Cct8-010 retained_intron Mus_musculus 0 292
ENSMUST00000177485 Cct8-004 retained_intron Mus_musculus 0 292
ENSMUST00000176589 Cct8-009 retained_intron Mus_musculus 0 270

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