C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin IE
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000288235 MYO1E-001 ENSG00000157483 9606 - 15:59132434-59372900 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000288235
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000288235 3.054±0.00 2.273±0.00 2.536±0.00 1.524±0.73 2.527±0.82 4.097±0.97 0.690±0.37 2.363±1.25 1.721±0.17 3.792±0.19 1.081±0.74 3.978±1.24 5.424±0.00 2.351±0.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000503 CIL_000503_0002 CGP 15:59105078-59372900

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000146 TAS microfilament motor activity
GO:0001570 IEA vasculogenesis
GO:0001701 IEA in utero embryonic development
GO:0001822 IEA kidney development
GO:0003094 ISS glomerular filtration
GO:0003774 TAS:IEA motor activity
GO:0005515 IPI:IEA protein binding
GO:0005516 IDA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005737 ISS cytoplasm
GO:0005856 IDA cytoskeleton
GO:0005911 ISS cell-cell junction
GO:0005912 ISS adherens junction
GO:0006200 IDA ATP catabolic process
GO:0006807 IEA nitrogen compound metabolic process
GO:0006897 IMP endocytosis
GO:0015629 TAS actin cytoskeleton
GO:0016459 TAS:IEA myosin complex
GO:0030048 TAS actin filament-based movement
GO:0030097 IEA hemopoiesis
GO:0032836 ISS glomerular basement membrane development
GO:0035091 IDA phosphatidylinositol binding
GO:0035166 IEA post-embryonic hemopoiesis
GO:0042623 IDA ATPase activity, coupled
GO:0045334 IDA clathrin-coated endocytic vesicle
GO:0048008 IEA platelet-derived growth factor receptor signaling pathway
GO:0051015 IDA actin filament binding
GO:0070062 IDA extracellular vesicular exosome
GO:0072015 ISS glomerular visceral epithelial cell development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034745 Myo1e-201 protein_coding Mus_musculus 0 4529
ENSDART00000052539 myo1ea-201 protein_coding Danio_rerio 0 1522

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