C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: podoplanin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000294489 PDPN-001 ENSG00000162493 9606 + 1:13583465-13617957 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LungENST00000294489
Transcript ID Lung
ENST00000294489 0.432±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 ISS cell morphogenesis
GO:0001726 ISS ruffle
GO:0001946 ISS lymphangiogenesis
GO:0005886 ISS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006693 IEA prostaglandin metabolic process
GO:0006928 IEA cellular component movement
GO:0006954 IEA inflammatory response
GO:0007155 IEA cell adhesion
GO:0007165 IEA signal transduction
GO:0007399 IEA nervous system development
GO:0008283 IEA cell proliferation
GO:0008360 IEA regulation of cell shape
GO:0009897 IEA external side of plasma membrane
GO:0010572 IEA positive regulation of platelet activation
GO:0016021 IEA integral component of membrane
GO:0016324 IEA apical plasma membrane
GO:0016337 IEA single organismal cell-cell adhesion
GO:0030027 ISS lamellipodium
GO:0030175 ISS filopodium
GO:0030324 ISS lung development
GO:0030335 IEA positive regulation of cell migration
GO:0035239 IEA tube morphogenesis
GO:0048286 IEA lung alveolus development
GO:0051272 ISS positive regulation of cellular component movement
GO:0055093 IEA response to hyperoxia
GO:2000045 IEA regulation of G1/S transition of mitotic cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000004 58

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