C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 1 open reading frame 52
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000294661 C1orf52-003 ENSG00000162642 9606 - 1:85249953-85259672 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLungMuscleOvaryPlacentaTestisENST00000294661
Transcript ID Bladder Brain Breast Colon Heart Lung Muscle Ovary Placenta Testis
ENST00000294661 0.243±0.00 2.310±0.35 0.856±0.25 0.795±0.00 0.287±0.23 0.410±0.00 0.017±0.00 0.784±0.12 0.933±0.11 0.978±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QR CIL_0007QR_0001 VISTA 1:84924957-85525799

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134575 2410004B18Rik-002 nonsense_mediated_decay Mus_musculus 0 905
ENSMUST00000039571 2410004B18Rik-001 protein_coding Mus_musculus 0 549
ENSMUST00000152783 2410004B18Rik-004 nonsense_mediated_decay Mus_musculus 0 492
ENSMUST00000190472 2410004B18Rik-007 protein_coding Mus_musculus 0 346
ENSMUST00000188034 2410004B18Rik-006 protein_coding Mus_musculus 0 292
ENSMUST00000189656 2410004B18Rik-008 retained_intron Mus_musculus 0 257

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