C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: guanylate binding protein 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000294671 GBP7-001 ENSG00000213512 9606 - 1:89131751-89176040 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverENST00000294671
Transcript ID Kidney Liver
ENST00000294671 8.506±0.00 2.416±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000033 CIL_000033_0004 CGP 1:89052319-89150456
CIL_000033 CIL_000033_0006 CGP 1:89106132-89176040
CIL_000033 CIL_000033_0008 CGP 1:89131751-89198932

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106221 Gbp3-003 protein_coding Mus_musculus 0 1212
ENSMUST00000029935 Gbp3-001 protein_coding Mus_musculus 0 1212
ENSMUST00000106222 Gbp3-002 protein_coding Mus_musculus 0 1212
ENSMUST00000045097 Gbp7-201 protein_coding Mus_musculus 0 1136
ENSMUST00000171263 Gbp7-202 protein_coding Mus_musculus 0 1136
ENSMUST00000050011 Gbp6-201 protein_coding Mus_musculus 0 887
ENSMUST00000065588 Gbp6-202 protein_coding Mus_musculus 0 869
ENSMUST00000100961 Gbp9-202 protein_coding Mus_musculus 0 819
ENSMUST00000031238 Gbp9-201 protein_coding Mus_musculus 0 819
ENSMUST00000142731 Gbp3-006 processed_transcript Mus_musculus 0 523
ENSMUST00000165774 Gbp2-001 protein_coding Mus_musculus 0 418
ENSMUST00000169572 Gbp2-002 nonsense_mediated_decay Mus_musculus 0 274

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