C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chaperonin containing TCP1, subunit 3 (gamma)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000295688 CCT3-001 ENSG00000163468 9606 - 1:156308968-156338465 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000295688
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000295688 5.977±0.00 2.557±0.00 8.334±3.40 7.594±0.00 8.925±2.73 4.206±1.87 3.943±0.00 3.993±0.00 8.769±0.00 39.616±18.22 58.841±12.75 16.150±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000898 CIL_000898_0001 VISTA 1:155789635-156392759
CIL_0008P5 CIL_0008P5_0001 VISTA 1:155795688-156399252
CIL_0008JO CIL_0008JO_0001 VISTA 1:156202708-156805613

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002199 IEA zona pellucida receptor complex
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005832 IEA chaperonin-containing T-complex
GO:0005856 TAS cytoskeleton
GO:0005874 IDA microtubule
GO:0005886 IDA plasma membrane
GO:0006457 IEA:TAS protein folding
GO:0007339 IEA binding of sperm to zona pellucida
GO:0044267 TAS:IEA cellular protein metabolic process
GO:0044297 IEA cell body
GO:0044822 IDA poly(A) RNA binding
GO:0046931 IEA pore complex assembly
GO:0051082 IEA unfolded protein binding
GO:0051084 TAS 'de novo' posttranslational protein folding
GO:0070062 IDA extracellular vesicular exosome
GO:1901998 IEA toxin transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001452 Cct3-001 protein_coding Mus_musculus 0 2409
ENSMUST00000164166 Cct3-006 protein_coding Mus_musculus 0 2036
ENSMUST00000168062 Cct3-005 protein_coding Mus_musculus 0 2026
ENSMUST00000167718 Cct3-004 retained_intron Mus_musculus 0 1805
ENSMUST00000118023 Cct3-ps1-001 processed_pseudogene Mus_musculus 0 1642
ENSMUST00000118450 Gm11516-001 processed_pseudogene Mus_musculus 0 1463
ENSMUST00000167000 Cct3-002 retained_intron Mus_musculus 0 1088
ENSMUST00000164783 Cct3-003 retained_intron Mus_musculus 0 1066
ENSMUST00000163735 Cct3-007 protein_coding Mus_musculus 0 795

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