C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: origin recognition complex, subunit 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000297431 ORC5-001 ENSG00000164815 9606 - 7:104126341-104208047 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000297431
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000297431 2.077±0.00 2.297±0.00 0.790±0.00 5.567±1.03 3.789±0.71 2.240±1.38 1.005±0.51 2.888±1.78 2.811±0.66 1.456±0.30 1.963±0.35 9.516±8.28 5.536±2.35 17.676±3.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040Z CIL_00040Z_0001 CGP 7:103471784-104208047
CIL_0005BQ CIL_0005BQ_0002 CGP 7:104126341-104907232

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000166 TAS nucleotide binding
GO:0000278 TAS mitotic cell cycle
GO:0000808 IDA origin recognition complex
GO:0003674 ND molecular_function
GO:0003688 TAS DNA replication origin binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005664 IDA nuclear origin of replication recognition complex
GO:0005737 IDA cytoplasm
GO:0006260 NAS DNA replication
GO:0006270 TAS DNA replication initiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030872 Orc5-001 protein_coding Mus_musculus 0 2331
ENSMUST00000135906 Orc5-002 retained_intron Mus_musculus 0 1421
ENSMUST00000141263 Orc5-003 protein_coding Mus_musculus 0 1149
ENSMUST00000142987 Orc5-006 processed_transcript Mus_musculus 0 869
ENSMUST00000138248 Orc5-005 processed_transcript Mus_musculus 0 226

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