C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HECT domain containing E3 ubiquitin protein ligase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000298068 HECTD2-005 ENSG00000165338 9606 + 10:91410345-91514761 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000298068
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000298068 1.008±0.00 0.916±0.00 1.459±0.76 0.892±0.07 0.931±0.65 0.449±0.06 2.027±0.00 2.786±2.48 0.929±0.03 0.763±0.00 1.765±1.19 0.594±0.06 2.153±0.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018O CIL_00018O_0001 CGP 10:91163012-91514829
CIL_0008L8 CIL_0008L8_0001 VISTA 10:91288732-91891966
CIL_00018N CIL_00018N_0001 CGP 10:91410285-91633054

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IEA:IBA ubiquitin-protein transferase activity
GO:0005634 IBA nucleus
GO:0005737 IBA cytoplasm
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0042787 IBA protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047247 Hectd2-001 protein_coding Mus_musculus 0 4237
ENSMUST00000169036 Hectd2-009 protein_coding Mus_musculus 0 3781
ENSMUST00000139215 Hectd2-002 nonsense_mediated_decay Mus_musculus 0 3439
ENSMUST00000155594 Hectd2-005 nonsense_mediated_decay Mus_musculus 0 1583
ENSMUST00000177381 Hectd2-008 nonsense_mediated_decay Mus_musculus 0 1526
ENSMUST00000141503 Hectd2-004 retained_intron Mus_musculus 0 920
ENSMUST00000142404 Hectd2-007 retained_intron Mus_musculus 0 737

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