C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: leucine rich repeat containing 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000298124 LRRC18-201 ENSG00000165383 9606 - 10:48909488-48935190 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLungOvaryTestisENST00000298124
Transcript ID Bladder Lung Ovary Testis
ENST00000298124 0.030±0.00 1.601±0.00 0.188±0.18 1.057±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002J0 CIL_0002J0_0002 CGP 10:48684876-48982956
CIL_0007OS CIL_0007OS_0001 UCNEbase 10:48836195-49372114
CIL_0008ZL CIL_0008ZL_0001 VISTA 10:48905403-49506260

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038956 Lrrc18-001 protein_coding Mus_musculus 0 880
ENSMUST00000120951 Lrrc18-006 protein_coding Mus_musculus 0 736
ENSMUST00000120866 Lrrc18-002 protein_coding Mus_musculus 0 736

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