C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000299402 APBB1-002 ENSG00000166313 9606 - 11:6395125-6419070 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000299402
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000299402 17.247±0.00 14.263±0.00 10.188±0.00 19.675±0.00 10.303±9.37 13.993±0.00 12.705±11.96 5.099±3.08 16.707±17.39 6.712±3.25 14.525±7.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AE CIL_0004AE_0001 CGP 11:6390431-6419414
CIL_0004N8 CIL_0004N8_0001 CGP 11:6395124-6442617

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000191601 Apbb1-003 protein_coding Mus_musculus 0 3120
ENSMUST00000189378 Apbb1-002 protein_coding Mus_musculus 0 3118
ENSMUST00000191011 Apbb1-001 protein_coding Mus_musculus 0 3085
ENSMUST00000081165 Apbb1-201 protein_coding Mus_musculus 0 3031
ENSMUST00000189072 Apbb1-004 protein_coding Mus_musculus 0 2196
ENSMUST00000190369 Apbb1-005 protein_coding Mus_musculus 0 2196
ENSMUST00000188368 Apbb1-008 protein_coding Mus_musculus 0 2196
ENSMUST00000187057 Apbb1-007 protein_coding Mus_musculus 0 2019
ENSMUST00000188001 Apbb1-006 retained_intron Mus_musculus 0 1840
ENSMUST00000189265 Apbb1-018 protein_coding Mus_musculus 0 1411
ENSMUST00000188440 Apbb1-017 protein_coding Mus_musculus 0 979
ENSMUST00000187721 Apbb1-012 protein_coding Mus_musculus 0 837
ENSMUST00000187683 Apbb1-011 protein_coding Mus_musculus 0 761
ENSMUST00000187051 Apbb1-010 protein_coding Mus_musculus 0 603
ENSMUST00000191250 Apbb1-015 retained_intron Mus_musculus 0 590
ENSMUST00000186814 Apbb1-014 retained_intron Mus_musculus 0 558
ENSMUST00000186868 Apbb1-009 protein_coding Mus_musculus 0 527
ENSMUST00000188726 Apbb1-016 protein_coding Mus_musculus 0 514
ENSMUST00000190961 Apbb1-013 retained_intron Mus_musculus 0 479
ENSMUST00000087256 Apbb2-201 protein_coding Mus_musculus 0.000000000003 79
ENSMUST00000160063 Apbb2-017 protein_coding Mus_musculus 0.000000000003 79
ENSMUST00000162366 Apbb2-008 protein_coding Mus_musculus 0.000000000003 79
ENSMUST00000160870 Apbb2-007 protein_coding Mus_musculus 0.000000000003 79
ENSMUST00000160185 Apbb2-006 retained_intron Mus_musculus 0.000000000003 79
ENSMUST00000162401 Apbb2-005 retained_intron Mus_musculus 0.000000000003 79
ENSMUST00000159512 Apbb2-003 protein_coding Mus_musculus 0.000000000003 79
ENSMUST00000159786 Apbb2-001 protein_coding Mus_musculus 0.000000000003 79
ENSMUST00000162349 Apbb2-004 protein_coding Mus_musculus 0.000000000003 79

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