C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 21 open reading frame 59
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000300260 C21orf59-003 ENSG00000159079 9606 - 21:32601785-32612603 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMusclePlacentaENST00000300260
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Placenta
ENST00000300260 7.979±0.00 12.463±0.00 9.720±0.00 4.988±0.00 4.118±2.58 5.304±0.00 11.496±0.00 10.012±0.00 16.097±0.00 6.961±6.69 6.509±1.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TI CIL_0008TI_0001 VISTA 21:32549146-33151638

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125519 1110004E09Rik-006 nonsense_mediated_decay Mus_musculus 0 793
ENSMUST00000023694 1110004E09Rik-001 protein_coding Mus_musculus 0 531
ENSMUST00000129345 1110004E09Rik-004 protein_coding Mus_musculus 0 337
ENSMUST00000149833 1110004E09Rik-005 protein_coding Mus_musculus 0 316
ENSMUST00000142340 1110004E09Rik-003 protein_coding Mus_musculus 0 231
ENSMUST00000131583 1110004E09Rik-002 processed_transcript Mus_musculus 1e-38 165

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