C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000300441 ACSF2-001 ENSG00000167107 9606 + 17:50426158-50474835 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000300441
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000300441 4.458±0.00 4.892±0.00 2.154±0.00 7.705±7.18 6.893±0.00 1.938±1.38 7.153±5.18 3.373±0.00 3.232±0.00 1.763±0.00 8.482±6.69 11.888±2.86 1.811±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088W CIL_00088W_0001 VISTA 17:49956976-50560219
CIL_0004X5 CIL_0004X5_0002 CGP 17:50426158-50474845

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005524 IEA ATP binding
GO:0006631 IEA fatty acid metabolic process
GO:0008152 IEA metabolic process
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103164 Acsf2-001 protein_coding Mus_musculus 0 1701
ENSMUST00000131852 Gm5540-001 processed_pseudogene Mus_musculus 0 1613
ENSMUST00000155122 Acsf2-004 processed_transcript Mus_musculus 0 536
ENSMUST00000131808 Acsf2-003 processed_transcript Mus_musculus 0 385

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