C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: REST corepressor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000301459 RCOR2-001 ENSG00000167771 9606 - 11:63911221-63916844 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000301459
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000301459 0.070±0.00 0.205±0.00 1.199±0.27 0.644±0.04 0.285±0.16 0.597±0.07 0.154±0.00 0.103±0.00 0.075±0.01 0.128±0.04 2.054±1.62 0.921±0.42 2.838±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004M6 CIL_0004M6_0002 CGP 11:63838928-63916844
CIL_0003EO CIL_0003EO_0002 CGP 11:63911221-63957328

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000785 IEA chromatin
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003714 IEA transcription corepressor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0045892 IEA negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066646 Rcor2-001 protein_coding Mus_musculus 0 2241
ENSMUST00000113369 Rcor2-201 protein_coding Mus_musculus 0 1893
ENSMUST00000134167 Rcor2-003 retained_intron Mus_musculus 0 466
ENSMUST00000140442 Rcor2-002 protein_coding Mus_musculus 0 411

Loading