C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calmodulin binding transcription activator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000303635 CAMTA1-001 ENSG00000171735 9606 + 1:6785324-7769706 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000303635
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000303635 0.175±0.00 8.383±0.00 0.412±0.00 0.613±0.54 0.090±0.00 0.695±0.55 0.153±0.00 2.157±0.00 0.156±0.00 0.391±0.05 0.295±0.03 1.395±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019N CIL_00019N_0002 CGP 1:6785324-7781432

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097774 Camta1-002 protein_coding Mus_musculus 0 7356
ENSMUST00000049790 Camta1-001 protein_coding Mus_musculus 0 7107
ENSMUST00000169423 Camta1-201 protein_coding Mus_musculus 0 6612
ENSMUST00000105668 Camta1-012 protein_coding Mus_musculus 0 1644
ENSMUST00000140030 Camta1-007 protein_coding Mus_musculus 0 1380
ENSMUST00000105670 Camta1-006 protein_coding Mus_musculus 0 1245
ENSMUST00000143434 Camta1-010 processed_transcript Mus_musculus 0 739
ENSMUST00000185034 Camta1-003 processed_transcript Mus_musculus 0 492
ENSMUST00000153938 Camta1-013 nonsense_mediated_decay Mus_musculus 0 492
ENSMUST00000119120 Camta2-007 protein_coding Mus_musculus 0 346
ENSMUST00000108544 Camta2-005 protein_coding Mus_musculus 0 346
ENSMUST00000100933 Camta2-006 protein_coding Mus_musculus 0 346
ENSMUST00000036299 Camta2-004 protein_coding Mus_musculus 0 294
ENSMUST00000131948 Camta1-009 protein_coding Mus_musculus 0 274
ENSMUST00000155685 Camta1-005 processed_transcript Mus_musculus 0 228
ENSMUST00000135780 Camta1-004 processed_transcript Mus_musculus 0 222
ENSMUST00000120261 Camta2-009 protein_coding Mus_musculus 2e-37 163
ENSMUST00000108545 Camta2-008 protein_coding Mus_musculus 2e-37 163
ENSMUST00000145823 Camta2-003 nonsense_mediated_decay Mus_musculus 2e-37 163
ENSDART00000146633 camta1a-001 protein_coding Danio_rerio 1e-35 158
ENSDART00000046663 CR847998.1-201 protein_coding Danio_rerio 1e-29 137

Loading