C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 38, member 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000303735 SLC38A11-001 ENSG00000169507 9606 - 2:164896186-164955525 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonKidneyLiverMuscleOvaryPlacentaTestisENST00000303735
Transcript ID Adrenal Bladder Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENST00000303735 0.312±0.00 2.655±0.00 0.053±0.00 0.010±0.00 0.821±0.00 0.111±0.06 0.051±0.00 2.674±1.61 0.056±0.03 0.228±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CM CIL_0006CM_0001 CGP 2:164653624-164955525
CIL_0006CP CIL_0006CP_0001 CGP 2:164896186-165204067

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006814 IEA sodium ion transport
GO:0006865 IEA amino acid transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127623 Slc38a11-004 protein_coding Mus_musculus 0 1112
ENSMUST00000112420 Slc38a11-201 protein_coding Mus_musculus 0 889
ENSMUST00000124918 Slc38a11-005 protein_coding Mus_musculus 0 889
ENSMUST00000152324 Slc38a11-001 protein_coding Mus_musculus 0 628
ENSMUST00000155962 Slc38a11-007 protein_coding Mus_musculus 0 237
ENSMUST00000141690 Slc38a11-006 processed_transcript Mus_musculus 0 237
ENSMUST00000145583 Slc38a11-003 processed_transcript Mus_musculus 0 237
ENSMUST00000155422 Slc38a11-002 processed_transcript Mus_musculus 0 237

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