C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: angiomotin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000304758 AMOT-001 ENSG00000126016 9606 - X:112774503-112840815 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000304758
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000304758 0.466±0.00 2.392±0.00 3.451±3.02 1.160±0.37 0.220±0.10 1.618±0.00 0.373±0.00 0.372±0.13 1.343±0.93 3.936±1.06 3.714±3.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000717 CIL_000717_0001 CGP X:112630648-112840815
CIL_000718 CIL_000718_0001 CGP X:112774503-114910061

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001725 IDA stress fiber
GO:0001726 IDA ruffle
GO:0004872 IDA receptor activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005884 IDA actin filament
GO:0005923 IDA tight junction
GO:0007043 TAS cell-cell junction assembly
GO:0008180 IDA COP9 signalosome
GO:0009897 IDA external side of plasma membrane
GO:0009986 IDA cell surface
GO:0016021 IDA integral component of membrane
GO:0016525 IDA negative regulation of angiogenesis
GO:0030027 IDA lamellipodium
GO:0030036 TAS actin cytoskeleton organization
GO:0030139 IDA endocytic vesicle
GO:0030334 IDA regulation of cell migration
GO:0034613 IDA cellular protein localization
GO:0035329 IGI hippo signaling
GO:0043116 IDA negative regulation of vascular permeability
GO:0043532 IDA angiostatin binding
GO:0043536 IDA positive regulation of blood vessel endothelial cell migration
GO:0045793 TAS positive regulation of cell size
GO:0051496 TAS positive regulation of stress fiber assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112836 Amot-201 protein_coding Mus_musculus 0 1849
ENSMUST00000112835 Amot-003 protein_coding Mus_musculus 0 1849
ENSMUST00000125271 Amot-001 protein_coding Mus_musculus 0 1849
ENSMUST00000138187 Amot-002 protein_coding Mus_musculus 0 1607
ENSMUST00000143610 Amot-004 protein_coding Mus_musculus 0 545
ENSMUST00000135832 Amot-005 retained_intron Mus_musculus 0 464

Loading