C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: growth associated protein 43
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000305124 GAP43-001 ENSG00000172020 9606 + 3:115623324-115721490 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000305124
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000305124 0.026±0.00 1.353±0.00 0.033±0.00 99.659±37.64 0.522±0.00 4.380±3.60 0.181±0.02 0.037±0.00 0.075±0.06 0.368±0.00 0.025±0.01 0.341±0.23 1.383±0.85 0.161±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000L7 CIL_0000L7_0002 CGP 3:115623324-117139389

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005886 IDA plasma membrane
GO:0007205 TAS protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0009611 TAS response to wounding
GO:0030054 IEA cell junction
GO:0031527 IDA filopodium membrane
GO:0040008 IEA regulation of growth
GO:0045202 IEA synapse
GO:0051489 IDA regulation of filopodium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102817 Gap43-001 protein_coding Mus_musculus 0 1096
ENSMUST00000125187 Gap43-002 processed_transcript Mus_musculus 0 756

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