| Transcript ID | Heart | Lung | Ovary |
|---|---|---|---|
| ENST00000307142 | 3.486±0.00 | 2.871±0.00 | 9.549±7.49 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | synaptopodin 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000307142  |
SYNPO2-001 |
ENSG00000172403 |
9606 | + |
4:118888841-119061247  |
protein_coding |
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003779 | IEA | actin binding |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0005634 | ISS | nucleus |
| GO:0005925 | IDA | focal adhesion |
| GO:0015629 | IDA | actin cytoskeleton |
| GO:0030018 | ISS | Z disc |
| GO:0051371 | ISS | muscle alpha-actinin binding |
| GO:0071889 | ISS | 14-3-3 protein binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000106426
|
Synpo2-005 | protein_coding | Mus_musculus | 0 | 3251 |
|
ENSMUST00000051443
|
Synpo2-001 | protein_coding | Mus_musculus | 0 | 2865 |
|
ENSMUST00000106427
|
Synpo2-004 | protein_coding | Mus_musculus | 0 | 2702 |
|
ENSMUST00000184590
|
Synpo2-006 | processed_transcript | Mus_musculus | 0 | 547 |
|
ENSMUST00000184403
|
Synpo2-002 | processed_transcript | Mus_musculus | 9.80909e-45 | 187 |
|
ENSMUST00000139160
|
Synpo2-003 | protein_coding | Mus_musculus | 2e-27 | 130 |
|
ENSMUST00000034431
|
Tmem170-201 | protein_coding | Mus_musculus | 0.000000001 | 71 |
|
ENSMUST00000173269
|
Neu1-002 | retained_intron | Mus_musculus | 0.00001 | 58 |
|
ENSMUST00000021864
|
Ssr1-201 | protein_coding | Mus_musculus | 0.0001 | 55 |
