C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | PDZ domain containing ring finger 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000308537  |
PDZRN3-002 |
ENSG00000121440 |
9606 | - |
3:73408058-73624840  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00098G | CIL_00098G_0001 | VISTA | 3:73222646-73825117 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004842 | ISS | ubiquitin-protein transferase activity |
| GO:0005515 | IEA | protein binding |
| GO:0008270 | IEA | zinc ion binding |
| GO:0016567 | ISS | protein ubiquitination |
| GO:0016874 | IEA | ligase activity |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000075994
|
Pdzrn3-001 | protein_coding | Mus_musculus | 0 | 1325 |
|
ENSMUST00000151175
|
Pdzrn3-003 | protein_coding | Mus_musculus | 0 | 544 |
|
ENSMUST00000124884
|
Pdzrn3-004 | processed_transcript | Mus_musculus | 3e-38 | 163 |
