C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centrosomal protein 290kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000309041 CEP290-201 ENSG00000198707 9606 - 12:88049014-88141307 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartLiverLungMuscleOvaryPlacentaENST00000309041
Transcript ID Adipose Breast Heart Liver Lung Muscle Ovary Placenta
ENST00000309041 0.662±0.00 0.437±0.00 0.233±0.00 0.189±0.00 0.334±0.00 0.213±0.00 0.758±0.00 0.187±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000215 CIL_000215_0002 CGP 12:88033846-88142216
CIL_000212 CIL_000212_0002 CGP 12:88049014-88199887

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005813 IEA centrosome
GO:0060271 IEA cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164751 Cep290-201 protein_coding Mus_musculus 0 7943
ENSMUST00000054471 4930430F08Rik-201 protein_coding Mus_musculus 0 248

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