C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 4 (anion exchanger), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000310317 SLC4A2-201 ENSG00000164889 9606 + 7:151061251-151076522 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000310317
Transcript ID Ovary Placenta Testis
ENST00000310317 17.548±0.00 18.331±0.00 4.094±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0001 VISTA 7:150668461-151272977
CIL_0004ET CIL_0004ET_0001 CGP 7:151048292-151058530
CIL_0004ES CIL_0004ES_0001 CGP 7:151053812-151076527
CIL_0004ER CIL_0004ER_0001 CGP 7:151057210-151080866

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005452 IEA inorganic anion exchanger activity
GO:0006810 IEA transport
GO:0006820 IEA anion transport
GO:0008509 IEA anion transmembrane transporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115049 Slc4a2-009 protein_coding Mus_musculus 0 3951
ENSMUST00000115047 Slc4a2-002 protein_coding Mus_musculus 0 3951
ENSMUST00000080067 Slc4a2-001 protein_coding Mus_musculus 0 3951
ENSMUST00000132505 Slc4a2-013 retained_intron Mus_musculus 0 732
ENSMUST00000146765 Slc4a2-012 retained_intron Mus_musculus 0 641
ENSMUST00000140722 Slc4a2-014 retained_intron Mus_musculus 0 566
ENSMUST00000149537 Fastk-006 retained_intron Mus_musculus 0 246
ENSMUST00000115043 Fastk-004 protein_coding Mus_musculus 0 246

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