C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier organic anion transporter family, member 4C1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000310954 SLCO4C1-001 ENSG00000173930 9606 - 5:102233986-102296549 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000310954
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000310954 0.121±0.00 0.091±0.00 5.457±0.00 0.099±0.05 0.042±0.01 0.048±0.01 0.077±0.00 5.529±3.35 0.849±0.77 0.958±0.21 0.014±0.01 0.053±0.04 0.020±0.01 0.355±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZB CIL_0004ZB_0001 CGP 5:100806935-102296549

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006810 IEA transport
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation
GO:0043252 TAS sodium-independent organic anion transport
GO:0055085 TAS:IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071985 Slco4c1-001 protein_coding Mus_musculus 0 1812
ENSMUST00000189547 Slco6c1-002 protein_coding Mus_musculus 0.0003 53
ENSMUST00000027569 Slco6c1-001 protein_coding Mus_musculus 0.0003 53

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