C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurocalcin delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000311028 NCALD-201 ENSG00000104490 9606 - 8:101686543-102124334 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENST00000311028
Transcript ID Brain Ovary Placenta Testis
ENST00000311028 9.661±0.00 2.973±2.65 0.788±0.38 1.068±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004T4 CIL_0004T4_0002 CGP 8:101492432-102124907

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IDA actin binding
GO:0005509 IEA calcium ion binding
GO:0005622 IDA intracellular
GO:0005829 NAS cytosol
GO:0007268 TAS synaptic transmission
GO:0015631 IDA tubulin binding
GO:0016192 NAS vesicle-mediated transport
GO:0030130 NAS clathrin coat of trans-Golgi network vesicle
GO:0030276 IDA clathrin binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168992 Ncald-201 protein_coding Mus_musculus 0 1149
ENSMUST00000090150 Ncald-001 protein_coding Mus_musculus 0 1149
ENSMUST00000119730 Ncald-003 protein_coding Mus_musculus 0 1144
ENSMUST00000120746 Ncald-002 protein_coding Mus_musculus 0 1144
ENSMUST00000116445 Ncald-010 protein_coding Mus_musculus 0 922
ENSMUST00000153775 Ncald-007 protein_coding Mus_musculus 0 771
ENSMUST00000148652 Ncald-005 protein_coding Mus_musculus 0 719
ENSMUST00000132423 Ncald-011 processed_transcript Mus_musculus 0 562
ENSMUST00000150453 Ncald-004 protein_coding Mus_musculus 0 427

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