C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SPEG complex locus
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000312358 SPEG-004 ENSG00000072195 9606 + 2:219434846-219493632 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyMuscleOvaryENST00000312358
Transcript ID Adipose Breast Heart Kidney Muscle Ovary
ENST00000312358 0.561±0.00 2.872±0.00 5.198±4.96 0.240±0.00 21.500±7.22 1.419±1.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0001 VISTA 2:219106772-219707284
CIL_0006O0 CIL_0006O0_0001 CGP 2:219418377-219498287
CIL_0006O1 CIL_0006O1_0001 CGP 2:219434846-219506988

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IEA in utero embryonic development
GO:0004672 IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006468 IEA protein phosphorylation
GO:0007517 TAS muscle organ development
GO:0008285 TAS negative regulation of cell proliferation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0042692 IEA muscle cell differentiation
GO:0055013 IEA cardiac muscle cell development
GO:0060541 IEA respiratory system development
GO:0072358 IEA cardiovascular system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087122 Speg-001 protein_coding Mus_musculus 0 11260
ENSMUST00000137868 Speg-003 protein_coding Mus_musculus 0 10010
ENSMUST00000113590 Speg-002 protein_coding Mus_musculus 0 2846
ENSMUST00000132222 Speg-004 processed_transcript Mus_musculus 0 1308
ENSMUST00000125118 Speg-007 retained_intron Mus_musculus 0 649
ENSMUST00000132228 Speg-011 nonsense_mediated_decay Mus_musculus 0 545
ENSMUST00000122266 Speg-009 protein_coding Mus_musculus 0 540
ENSMUST00000113587 Speg-014 protein_coding Mus_musculus 0 540
ENSMUST00000113588 Speg-013 protein_coding Mus_musculus 0 540
ENSMUST00000113589 Speg-008 protein_coding Mus_musculus 0 540
ENSMUST00000148515 Speg-006 protein_coding Mus_musculus 0 508
ENSMUST00000125306 Speg-012 nonsense_mediated_decay Mus_musculus 0 398
ENSMUST00000146705 Speg-005 processed_transcript Mus_musculus 0 379
ENSMUST00000143679 Speg-010 retained_intron Mus_musculus 0 303

Loading