C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SWIM-type zinc finger 7 associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000312423 SWSAP1-001 ENSG00000173928 9606 + 19:11374685-11376951 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312423
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312423 0.432±0.00 0.774±0.00 0.281±0.20 0.448±0.28 0.596±0.19 0.320±0.18 0.869±0.32 0.704±0.53 0.373±0.17 0.301±0.16 0.941±0.46 1.760±0.55 1.456±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SH CIL_0003SH_0001 CGP 19:11355386-11376951
CIL_00016B CIL_00016B_0001 CGP 19:11374685-11384342

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000724 IMP double-strand break repair via homologous recombination
GO:0003697 IDA single-stranded DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006200 IDA ATP catabolic process
GO:0016887 IDA ATPase activity
GO:0050821 IMP protein stabilization
GO:0097196 IDA Shu complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000148884 Blzf1-004 retained_intron Mus_musculus 0.0001 53

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