C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000312865 MED25-001 ENSG00000104973 9606 + 19:49818289-49836979 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312865
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312865 20.323±0.00 24.285±0.00 25.035±0.00 25.164±0.00 17.539±0.00 13.076±0.00 25.644±0.00 6.935±0.00 26.678±0.00 39.604±0.00 48.556±21.40 26.943±1.24 58.575±0.80

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0008134 IPI transcription factor binding
GO:0008219 IEA cell death
GO:0010467 TAS gene expression
GO:0035563 IMP positive regulation of chromatin binding
GO:0042974 IPI retinoic acid receptor binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046965 IPI retinoid X receptor binding
GO:0048147 IMP negative regulation of fibroblast proliferation
GO:0071158 IMP positive regulation of cell cycle arrest
GO:2001178 IMP positive regulation of mediator complex assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003049 Med25-201 protein_coding Mus_musculus 0 2483
ENSMUST00000132521 Ptov1-006 retained_intron Mus_musculus 0 444
ENSMUST00000046575 Ptov1-001 protein_coding Mus_musculus 0 444
ENSMUST00000132707 Ptov1-004 processed_transcript Mus_musculus 0 361
ENSMUST00000140732 Ptov1-002 retained_intron Mus_musculus 0 202

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