C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transforming, acidic coiled-coil containing protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000313288 TACC3-001 ENSG00000013810 9606 + 4:1721539-1745171 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLungOvaryPlacentaTestisENST00000313288
Transcript ID Adipose Adrenal Brain Breast Colon Heart Lung Ovary Placenta Testis
ENST00000313288 0.992±0.00 4.584±0.00 0.434±0.00 0.998±0.00 0.442±0.00 0.603±0.00 0.345±0.10 6.110±5.94 10.702±2.40 40.844±19.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TX CIL_0007TX_0001 VISTA 4:1311752-1912379
CIL_0003K0 CIL_0003K0_0001 CGP 4:1715952-1745176
CIL_0006V2 CIL_0006V2_0001 CGP 4:1721490-1808872

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IEA microtubule cytoskeleton organization
GO:0001666 IEA response to hypoxia
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0008283 IEA cell proliferation
GO:0019904 IEA protein domain specific binding
GO:0021987 IEA cerebral cortex development
GO:0022008 IEA neurogenesis
GO:0022027 IEA interkinetic nuclear migration
GO:0030097 IEA hemopoiesis
GO:0030953 IEA astral microtubule organization
GO:0032886 IEA regulation of microtubule-based process
GO:0042994 IEA cytoplasmic sequestering of transcription factor
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114426 Tacc3-002 protein_coding Mus_musculus 0 418
ENSMUST00000079534 Tacc3-003 protein_coding Mus_musculus 0 418

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