C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurogenin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000313341 NEUROG2-001 ENSG00000178403 9606 - 4:112513516-112516172 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonOvaryPlacentaTestisENST00000313341
Transcript ID Brain Breast Colon Ovary Placenta Testis
ENST00000313341 0.266±0.11 0.157±0.00 0.015±0.00 0.009±0.00 0.024±0.00 4.053±2.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007P9 CIL_0007P9_0001 UCNEbase 4:110617607-112523533
CIL_0008WR CIL_0008WR_0001 VISTA 4:112221234-112822374

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IEA neuron migration
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007411 IEA axon guidance
GO:0021954 IEA central nervous system neuron development
GO:0022008 IEA neurogenesis
GO:0030182 IEA neuron differentiation
GO:0030900 IEA forebrain development
GO:0043565 IEA sequence-specific DNA binding
GO:0045165 IEA cell fate commitment
GO:0045666 IEA positive regulation of neuron differentiation
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity
GO:0048469 IEA cell maturation
GO:0051091 ISS positive regulation of sequence-specific DNA binding transcription factor activity
GO:0070888 ISS E-box binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029587 Neurog2-001 protein_coding Mus_musculus 0 1146
ENSMUST00000050103 Neurog3-201 protein_coding Mus_musculus 7.00649e-43 180

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