C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NOP2/Sun domain family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000314622 NSUN3-001 ENSG00000178694 9606 + 3:94062916-94128545 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000314622
Transcript ID Adipose Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000314622 0.480±0.00 0.892±0.00 0.385±0.00 0.697±0.23 0.519±0.00 0.579±0.00 0.308±0.00 0.370±0.07 1.380±0.00 0.843±0.34 0.978±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VB CIL_0007VB_0001 VISTA 3:94032174-94634985

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063089 Nsun3-001 protein_coding Mus_musculus 0 1018
ENSMUST00000143314 Nsun3-002 nonsense_mediated_decay Mus_musculus 0 643
ENSMUST00000151583 Nsun3-006 processed_transcript Mus_musculus 0 444
ENSMUST00000152553 Nsun3-004 protein_coding Mus_musculus 3e-37 161
ENSMUST00000152842 Nsun3-003 processed_transcript Mus_musculus 3e-37 161

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