C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: autophagy/beclin-1 regulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000314845 AMBRA1-006 ENSG00000110497 9606 - 11:46396414-46591364 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000314845
Transcript ID Kidney
ENST00000314845 0.165±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LK CIL_0002LK_0002 CGP 11:46385098-46594125

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005930 ISS axoneme
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099712 Ambra1-001 protein_coding Mus_musculus 0 5339
ENSMUST00000045705 Ambra1-002 protein_coding Mus_musculus 0 4150
ENSMUST00000111317 Ambra1-201 protein_coding Mus_musculus 0 2651
ENSMUST00000045699 Ambra1-004 protein_coding Mus_musculus 0 2651
ENSMUST00000111316 Ambra1-003 protein_coding Mus_musculus 0 2230
ENSMUST00000156496 Ambra1-007 processed_transcript Mus_musculus 0 1923
ENSMUST00000124132 Ambra1-005 processed_transcript Mus_musculus 0 1461
ENSMUST00000133490 Ambra1-006 processed_transcript Mus_musculus 0 837
ENSMUST00000142224 Ambra1-008 processed_transcript Mus_musculus 0 287

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