C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methionyl aminopeptidase type 1D (mitochondrial)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000315796 METAP1D-001 ENSG00000172878 9606 + 2:171999583-172082430 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastKidneyLiverLungOvaryPlacentaTestisENST00000315796
Transcript ID Adipose Adrenal Breast Kidney Liver Lung Ovary Placenta Testis
ENST00000315796 0.586±0.00 2.134±0.00 1.923±0.00 1.394±0.52 1.476±0.00 0.838±0.00 3.090±0.83 0.641±0.17 1.565±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RB CIL_0007RB_0001 VISTA 2:171663732-172264836
CIL_0008A7 CIL_0008A7_0001 VISTA 2:171663843-172264792
CIL_0007RB CIL_0007RB_0002 VISTA 2:171664837-172267307
CIL_00062P CIL_00062P_0002 CGP 2:171687409-171999859
CIL_0008C9 CIL_0008C9_0001 VISTA 2:171771791-172373521
CIL_0009AY CIL_0009AY_0001 VISTA 2:171783051-172384518
CIL_0004K0 CIL_0004K0_0001 CGP 2:171784370-171999859
CIL_0008AZ CIL_0008AZ_0001 VISTA 2:171791151-172392324
CIL_0008B0 CIL_0008B0_0001 VISTA 2:171792917-172394318
CIL_0004K4 CIL_0004K4_0001 CGP 2:171922448-172082430
CIL_0007JJ CIL_0007JJ_000X UCNEbase 2:171996261-172002046
CIL_0004K6 CIL_0004K6_0001 CGP 2:171999583-172089677

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004177 TAS:IEA aminopeptidase activity
GO:0005739 IDA mitochondrion
GO:0006508 IEA proteolysis
GO:0008235 TAS:IEA metalloexopeptidase activity
GO:0018206 TAS peptidyl-methionine modification
GO:0031365 TAS N-terminal protein amino acid modification
GO:0046872 IEA metal ion binding
GO:0070006 IEA metalloaminopeptidase activity
GO:0070084 IEA protein initiator methionine removal

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037210 Metap1d-001 protein_coding Mus_musculus 0 1371
ENSMUST00000139045 Metap1d-002 processed_transcript Mus_musculus 0 935
ENSMUST00000123858 Metap1d-004 processed_transcript Mus_musculus 0 719
ENSMUST00000124875 Metap1d-003 processed_transcript Mus_musculus 0 645
ENSMUST00000138873 Metap1d-005 processed_transcript Mus_musculus 0 545
ENSMUST00000148164 Metap1d-006 processed_transcript Mus_musculus 0 263

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